STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE30738.1S-layer homology domain-containing protein. (435 aa)    
Predicted Functional Partners:
SHE30570.1
Uncharacterized conserved protein, contains DUF3084 domain.
 
     0.840
SHE30608.1
RNase H-fold protein, predicted Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
 
     0.839
scpA
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.826
SHE30530.1
Lipopolysaccharide export system permease protein.
 
     0.817
SHE29916.1
Periplasmic chaperone for outer membrane proteins Skp.
 
     0.787
SHE29861.1
Beta-barrel assembly machine subunit BamA.
 
     0.770
SHE93660.1
Hypothetical protein.
  
     0.769
SHE92219.1
Hypothetical protein.
  
     0.762
SHF22029.1
SpoIVB peptidase S55.
  
     0.751
SHF21965.1
Predicted protein.
  
    0.741
Your Current Organism:
Schwartzia succinivorans
NCBI taxonomy Id: 1123243
Other names: S. succinivorans DSM 10502, Schwartzia succinivorans DSM 10502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.