STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE60465.1Iron complex transport system substrate-binding protein. (339 aa)    
Predicted Functional Partners:
SHE60424.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.995
SHE60381.1
Iron complex transport system ATP-binding protein.
 
 0.992
SHF35169.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.984
SHE60813.1
Zinc transport system ATP-binding protein.
  
 0.917
SHE60591.1
TonB protein C-terminal.
 
  
 0.755
SHE60503.1
Biopolymer transport protein ExbB.
  
  
 0.743
SHE60330.1
Vitamin B12 transporter.
 
  
 0.737
SHE60548.1
Biopolymer transport protein ExbD.
  
  
 0.729
SHE60635.1
Xylose isomerase-like TIM barrel.
 
     0.708
SHF35141.1
Iron complex transport system ATP-binding protein.
 
    0.691
Your Current Organism:
Schwartzia succinivorans
NCBI taxonomy Id: 1123243
Other names: S. succinivorans DSM 10502, Schwartzia succinivorans DSM 10502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.