STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE77901.1HD domain-containing protein. (257 aa)    
Predicted Functional Partners:
SHE28658.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.849
SHE77939.1
Hypothetical protein.
       0.776
SHE77835.1
Hypothetical protein.
       0.617
glnS
glutaminyl-tRNA synthetase.
       0.614
SHE57773.1
Signal transduction histidine kinase.
  
 
 0.574
SHF24853.1
Signal transduction histidine kinase.
  
 
 0.574
leuS
leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.559
SHF20833.1
Cytochrome c nitrite reductase small subunit.
  
  
 0.462
SHE35634.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
 
  
 0.436
SHF11242.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.432
Your Current Organism:
Schwartzia succinivorans
NCBI taxonomy Id: 1123243
Other names: S. succinivorans DSM 10502, Schwartzia succinivorans DSM 10502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.