STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF01174.1Peptide/nickel transport system permease protein. (266 aa)    
Predicted Functional Partners:
SHF01083.1
Peptide/nickel transport system ATP-binding protein.
 
 0.998
SHF01116.1
ABC transporter.
 
 0.996
SHF01206.1
Peptide/nickel transport system permease protein.
 
 0.994
SHF24684.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.994
SHF24656.1
Peptide/nickel transport system ATP-binding protein.
 
 0.993
SHF01140.1
Peptide/nickel transport system substrate-binding protein.
 0.984
SHF24579.1
Peptide/nickel transport system permease protein.
 
 0.976
SHF36474.1
Peptide/nickel transport system substrate-binding protein.
 0.937
SHF24632.1
Peptide/nickel transport system substrate-binding protein.
 0.936
SHF01054.1
Methyltransferase domain-containing protein.
 
     0.697
Your Current Organism:
Schwartzia succinivorans
NCBI taxonomy Id: 1123243
Other names: S. succinivorans DSM 10502, Schwartzia succinivorans DSM 10502
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