STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF11370.1Glutathione peroxidase; Belongs to the glutathione peroxidase family. (181 aa)    
Predicted Functional Partners:
SHF11340.1
Glutaredoxin-like protein, YruB-family.
  
 0.912
SHF11306.1
Thioredoxin reductase (NADPH).
  
  
 0.803
SHF27860.1
Ankyrin repeat.
    
 0.711
SHF37170.1
Glutaredoxin.
  
 0.674
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.635
SHF17869.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
     
 0.490
msrA
methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 
 0.445
SHE57773.1
Signal transduction histidine kinase.
   
  
 0.426
SHF24853.1
Signal transduction histidine kinase.
   
  
 0.426
SHF22539.1
Two-component system, chemotaxis family, response regulator CheV.
      
 0.410
Your Current Organism:
Schwartzia succinivorans
NCBI taxonomy Id: 1123243
Other names: S. succinivorans DSM 10502, Schwartzia succinivorans DSM 10502
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