STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF17742.1Fe-S cluster assembly protein SufB. (468 aa)    
Predicted Functional Partners:
SHF17776.1
Fe-S cluster assembly ATP-binding protein.
 0.999
SHF17671.1
Cysteine desulfurase / selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 0.995
SHF17639.1
Nitrogen fixation protein NifU.
 
 
 0.993
SHF17708.1
Uncharacterized protein family (UPF0051).
 
 
0.988
SHE34590.1
NifU homolog involved in Fe-S cluster formation.
  
 
 0.809
SHE59402.1
Cysteine desulfurase.
  
 
 0.647
SHE38852.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
     
 0.480
SHF17799.1
Methyltransferase domain-containing protein.
       0.445
SHF17610.1
Hypothetical protein.
       0.441
Your Current Organism:
Schwartzia succinivorans
NCBI taxonomy Id: 1123243
Other names: S. succinivorans DSM 10502, Schwartzia succinivorans DSM 10502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.