STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF17799.1Methyltransferase domain-containing protein. (549 aa)    
Predicted Functional Partners:
SHE94544.1
CTP:phosphocholine cytidylyltransferase.
    
 0.644
SHE88591.1
Hypothetical protein.
  
     0.629
SHE78950.1
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
    
 0.615
SHE59102.1
Hypothetical protein.
  
     0.606
SHF17835.1
CBS domain-containing protein.
       0.448
SHF17639.1
Nitrogen fixation protein NifU.
       0.445
SHF17671.1
Cysteine desulfurase / selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
       0.445
SHF17708.1
Uncharacterized protein family (UPF0051).
       0.445
SHF17742.1
Fe-S cluster assembly protein SufB.
       0.445
SHF17776.1
Fe-S cluster assembly ATP-binding protein.
       0.445
Your Current Organism:
Schwartzia succinivorans
NCBI taxonomy Id: 1123243
Other names: S. succinivorans DSM 10502, Schwartzia succinivorans DSM 10502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.