STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379465_00548Unannotated protein. (684 aa)    
Predicted Functional Partners:
GCA_000379465_08145
Unannotated protein.
   
 0.936
GCA_000379465_00549
Unannotated protein.
 
   
 0.910
GCA_000379465_00550
Unannotated protein.
 
   
 0.908
GCA_000379465_00547
Unannotated protein.
     
 0.845
GCA_000379465_00552
Unannotated protein.
     0.838
GCA_000379465_00546
Unannotated protein.
  
   0.700
GCA_000379465_02857
Unannotated protein.
    
 0.672
GCA_000379465_03482
Unannotated protein.
    
 0.672
GCA_000379465_03889
Unannotated protein.
    
  0.518
GCA_000379465_07656
Unannotated protein.
    
 0.517
Your Current Organism:
Sciscionella marina
NCBI taxonomy Id: 1123244
Other names: S. marina DSM 45152, Sciscionella marina DSM 45152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.