STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379465_01129Unannotated protein. (683 aa)    
Predicted Functional Partners:
GCA_000379465_00068
Unannotated protein.
   
  
 0.680
GCA_000379465_05793
Unannotated protein.
   
  
 0.680
GCA_000379465_00906
Unannotated protein.
 
   
 0.631
GCA_000379465_04561
Unannotated protein.
 
   
 0.625
GCA_000379465_04221
Unannotated protein.
 
   
 0.623
GCA_000379465_04559
Unannotated protein.
 
   
 0.615
GCA_000379465_06713
Unannotated protein.
  
  
 0.562
GCA_000379465_02011
Unannotated protein.
   
    0.526
GCA_000379465_02337
Unannotated protein.
  
  
 0.500
GCA_000379465_00278
Unannotated protein.
 
   
 0.465
Your Current Organism:
Sciscionella marina
NCBI taxonomy Id: 1123244
Other names: S. marina DSM 45152, Sciscionella marina DSM 45152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.