STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379465_01146Unannotated protein. (57 aa)    
Predicted Functional Partners:
GCA_000379465_01145
Unannotated protein.
 
   
 0.930
GCA_000379465_01147
Unannotated protein.
 
   
 0.897
GCA_000379465_01138
Unannotated protein.
 
   
 0.800
GCA_000379465_05077
Unannotated protein.
    
  0.783
GCA_000379465_05194
Unannotated protein.
     
 0.719
GCA_000379465_01144
Unannotated protein.
       0.655
GCA_000379465_02111
Unannotated protein.
  
  
  0.645
GCA_000379465_03096
Unannotated protein.
 
   
 0.564
GCA_000379465_00699
Unannotated protein.
  
     0.515
GCA_000379465_04109
Unannotated protein.
  
     0.505
Your Current Organism:
Sciscionella marina
NCBI taxonomy Id: 1123244
Other names: S. marina DSM 45152, Sciscionella marina DSM 45152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.