STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379465_02198Unannotated protein. (363 aa)    
Predicted Functional Partners:
GCA_000379465_00560
Unannotated protein.
  
 
 0.944
GCA_000379465_02199
Unannotated protein.
 
   
 0.944
GCA_000379465_05166
Unannotated protein.
  
 
 0.893
GCA_000379465_00486
Unannotated protein.
 
  
 0.887
GCA_000379465_03965
Unannotated protein.
  
 
 0.873
GCA_000379465_00694
Unannotated protein.
     
 0.819
GCA_000379465_06712
Unannotated protein.
     
 0.819
GCA_000379465_07080
Unannotated protein.
    
 0.773
GCA_000379465_00047
Unannotated protein.
     
 0.767
GCA_000379465_04907
Unannotated protein.
    
  0.758
Your Current Organism:
Sciscionella marina
NCBI taxonomy Id: 1123244
Other names: S. marina DSM 45152, Sciscionella marina DSM 45152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.