STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379465_04039Unannotated protein. (377 aa)    
Predicted Functional Partners:
GCA_000379465_04230
Unannotated protein.
 
 
 0.929
GCA_000379465_02250
Unannotated protein.
 
 
    0.851
GCA_000379465_06777
Unannotated protein.
     
 0.826
GCA_000379465_03044
Unannotated protein.
   
 
 0.817
GCA_000379465_04224
Unannotated protein.
 
 0.814
GCA_000379465_01745
Unannotated protein.
  
 
 0.783
GCA_000379465_04703
Unannotated protein.
  
 
 0.783
GCA_000379465_01757
Unannotated protein.
     
 0.771
GCA_000379465_06837
Unannotated protein.
     
 0.762
GCA_000379465_07385
Unannotated protein.
     
 0.697
Your Current Organism:
Sciscionella marina
NCBI taxonomy Id: 1123244
Other names: S. marina DSM 45152, Sciscionella marina DSM 45152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.