STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379465_04466Unannotated protein. (282 aa)    
Predicted Functional Partners:
GCA_000379465_04465
Unannotated protein.
 
 
 0.988
GCA_000379465_04464
Unannotated protein.
 
 0.987
GCA_000379465_01544
Unannotated protein.
 
 
 0.950
GCA_000379465_01546
Unannotated protein.
 
 0.947
GCA_000379465_02059
Unannotated protein.
 
 
 0.944
GCA_000379465_02058
Unannotated protein.
 
 0.943
GCA_000379465_00305
Unannotated protein.
 
 
 0.941
GCA_000379465_08091
Unannotated protein.
 
 0.939
GCA_000379465_05400
Unannotated protein.
 
 
 0.936
GCA_000379465_00306
Unannotated protein.
 
 0.935
Your Current Organism:
Sciscionella marina
NCBI taxonomy Id: 1123244
Other names: S. marina DSM 45152, Sciscionella marina DSM 45152
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