STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379465_06856Unannotated protein. (464 aa)    
Predicted Functional Partners:
GCA_000379465_06854
Unannotated protein.
 0.999
GCA_000379465_06855
Unannotated protein.
 
 0.999
GCA_000379465_05226
Unannotated protein.
   
  0.959
GCA_000379465_07656
Unannotated protein.
     
 0.864
GCA_000379465_00739
Unannotated protein.
     
 0.848
GCA_000379465_01170
Unannotated protein.
     
 0.835
GCA_000379465_03556
Unannotated protein.
     
 0.822
GCA_000379465_00973
Unannotated protein.
    
  0.819
GCA_000379465_01952
Unannotated protein.
    
  0.770
GCA_000379465_01663
Unannotated protein.
    
  0.759
Your Current Organism:
Sciscionella marina
NCBI taxonomy Id: 1123244
Other names: S. marina DSM 45152, Sciscionella marina DSM 45152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.