STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423645_02315Unannotated protein. (201 aa)    
Predicted Functional Partners:
GCA_000423645_00828
Unannotated protein.
 
 0.994
GCA_000423645_00488
Unannotated protein.
 
  
 0.985
GCA_000423645_01109
Unannotated protein.
  
 
 0.957
GCA_000423645_00215
Unannotated protein.
    
 0.903
GCA_000423645_02265
Unannotated protein.
     
 0.901
GCA_000423645_00222
Unannotated protein.
     
 0.877
GCA_000423645_02316
Unannotated protein.
 
     0.865
GCA_000423645_02319
Unannotated protein.
 
     0.857
GCA_000423645_02318
Unannotated protein.
       0.824
GCA_000423645_02317
Unannotated protein.
       0.822
Your Current Organism:
Sediminimonas qiaohouensis
NCBI taxonomy Id: 1123247
Other names: S. qiaohouensis DSM 21189, Sediminimonas qiaohouensis DSM 21189
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.