STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374045_00314Unannotated protein. (191 aa)    
Predicted Functional Partners:
GCA_000374045_00313
Unannotated protein.
  
 
 0.867
GCA_000374045_00311
Unannotated protein.
 
    0.836
GCA_000374045_00312
Unannotated protein.
       0.773
GCA_000374045_02501
Unannotated protein.
  
     0.764
GCA_000374045_00285
Unannotated protein.
    
 0.763
GCA_000374045_00286
Unannotated protein.
    
 0.715
GCA_000374045_03695
Unannotated protein.
  
 
 0.641
GCA_000374045_01319
Unannotated protein.
    
 0.534
GCA_000374045_03844
Unannotated protein.
    
 0.534
GCA_000374045_04794
Unannotated protein.
  
     0.512
Your Current Organism:
Segetibacter koreensis
NCBI taxonomy Id: 1123248
Other names: S. koreensis DSM 18137, Segetibacter koreensis DSM 18137
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.