STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374045_01948Unannotated protein. (349 aa)    
Predicted Functional Partners:
GCA_000374045_03525
Unannotated protein.
  
     0.766
GCA_000374045_01150
Unannotated protein.
  
     0.751
GCA_000374045_03353
Unannotated protein.
  
     0.745
GCA_000374045_04465
Unannotated protein.
     
 0.585
GCA_000374045_03642
Unannotated protein.
 
      0.528
GCA_000374045_01949
Unannotated protein.
       0.473
GCA_000374045_02981
Unannotated protein.
  
     0.455
GCA_000374045_02173
Unannotated protein.
  
     0.422
GCA_000374045_01426
Unannotated protein.
 
 
 0.415
GCA_000374045_01679
Unannotated protein.
  
     0.408
Your Current Organism:
Segetibacter koreensis
NCBI taxonomy Id: 1123248
Other names: S. koreensis DSM 18137, Segetibacter koreensis DSM 18137
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.