STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374045_02901Unannotated protein. (152 aa)    
Predicted Functional Partners:
GCA_000374045_02900
Unannotated protein.
       0.800
GCA_000374045_04464
Unannotated protein.
  
     0.754
GCA_000374045_02102
Unannotated protein.
  
     0.727
GCA_000374045_03857
Unannotated protein.
  
     0.725
GCA_000374045_02902
Unannotated protein.
       0.713
GCA_000374045_00337
Unannotated protein.
  
     0.674
GCA_000374045_00568
Unannotated protein.
  
     0.638
GCA_000374045_01390
Unannotated protein.
  
     0.630
GCA_000374045_00938
Unannotated protein.
  
     0.620
GCA_000374045_01957
Unannotated protein.
  
     0.609
Your Current Organism:
Segetibacter koreensis
NCBI taxonomy Id: 1123248
Other names: S. koreensis DSM 18137, Segetibacter koreensis DSM 18137
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.