STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374045_04890Unannotated protein. (329 aa)    
Predicted Functional Partners:
GCA_000374045_00888
Unannotated protein.
  
  
 
0.766
GCA_000374045_02729
Unannotated protein.
  
  
 0.728
GCA_000374045_04537
Unannotated protein.
 
  
  0.676
GCA_000374045_02099
Unannotated protein.
  
  
 0.667
GCA_000374045_03346
Unannotated protein.
  
  
  0.655
GCA_000374045_00418
Unannotated protein.
    
  0.633
GCA_000374045_01698
Unannotated protein.
   
 
  0.633
GCA_000374045_02487
Unannotated protein.
   
 
  0.633
GCA_000374045_03775
Unannotated protein.
    
  0.633
GCA_000374045_00987
Unannotated protein.
   
 
  0.595
Your Current Organism:
Segetibacter koreensis
NCBI taxonomy Id: 1123248
Other names: S. koreensis DSM 18137, Segetibacter koreensis DSM 18137
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.