STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374045_05044Unannotated protein. (235 aa)    
Predicted Functional Partners:
GCA_000374045_05043
Unannotated protein.
 
 0.991
GCA_000374045_05045
Unannotated protein.
 
 0.981
GCA_000374045_00653
Unannotated protein.
 
 
 0.972
GCA_000374045_00654
Unannotated protein.
 
 
 0.972
GCA_000374045_05046
Unannotated protein.
 
 0.962
GCA_000374045_05047
Unannotated protein.
 
 
 0.934
GCA_000374045_01634
Unannotated protein.
 
  
0.899
GCA_000374045_02930
Unannotated protein.
 
 0.859
GCA_000374045_00371
Unannotated protein.
  
 0.858
GCA_000374045_05048
Unannotated protein.
 
     0.853
Your Current Organism:
Segetibacter koreensis
NCBI taxonomy Id: 1123248
Other names: S. koreensis DSM 18137, Segetibacter koreensis DSM 18137
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.