STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000382285_03519Unannotated protein. (422 aa)    
Predicted Functional Partners:
GCA_000382285_02108
Unannotated protein.
   
 0.961
GCA_000382285_03179
Unannotated protein.
   
 0.961
GCA_000382285_03518
Unannotated protein.
 
 
 0.955
GCA_000382285_03573
Unannotated protein.
  
  
 0.640
GCA_000382285_00908
Unannotated protein.
     
 0.575
GCA_000382285_00909
Unannotated protein.
     
 0.551
GCA_000382285_03581
Unannotated protein.
 
 
 0.490
GCA_000382285_01716
Unannotated protein.
   
 
 0.485
GCA_000382285_01782
Unannotated protein.
  
 
 0.475
GCA_000382285_03517
Unannotated protein.
  
    0.466
Your Current Organism:
Solimonas variicoloris
NCBI taxonomy Id: 1123256
Other names: S. variicoloris DSM 15731, Singularimonas variicoloris DSM 15731, Solimonas variicoloris DSM 15731, gamma proteobacterium MN28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.