STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426685_03680Unannotated protein. (333 aa)    
Predicted Functional Partners:
GCA_000426685_02723
Unannotated protein.
 
 0.995
GCA_000426685_02308
Unannotated protein.
 
 
 0.952
GCA_000426685_03679
Unannotated protein.
     
 0.663
GCA_000426685_03678
Unannotated protein.
       0.653
GCA_000426685_00856
Unannotated protein.
 
  
 0.645
GCA_000426685_00852
Unannotated protein.
 
  
 0.642
GCA_000426685_02837
Unannotated protein.
 
 
    0.623
GCA_000426685_02697
Unannotated protein.
 
  
 0.617
GCA_000426685_01228
Unannotated protein.
 
  
 0.595
GCA_000426685_00887
Unannotated protein.
    
 0.584
Your Current Organism:
Solimonas flava
NCBI taxonomy Id: 1123257
Other names: S. flava DSM 18980, Sinobacter flavus DSM 18980, Solimonas flava CW-KD 4, Solimonas flava DSM 18980, gamma proteobacterium CW-KD 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.