STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380645_01422Unannotated protein. (315 aa)    
Predicted Functional Partners:
GCA_000380645_04094
Unannotated protein.
  
    0.730
GCA_000380645_04394
Unannotated protein.
  
    0.704
GCA_000380645_03495
Unannotated protein.
   
    0.701
GCA_000380645_00180
Unannotated protein.
   
    0.690
GCA_000380645_00298
Unannotated protein.
   
    0.679
GCA_000380645_00601
Unannotated protein.
   
    0.677
GCA_000380645_01139
Unannotated protein.
   
    0.677
GCA_000380645_01908
Unannotated protein.
   
    0.668
GCA_000380645_03302
Unannotated protein.
   
    0.668
GCA_000380645_03794
Unannotated protein.
   
    0.668
Your Current Organism:
Smaragdicoccus niigatensis
NCBI taxonomy Id: 1123258
Other names: S. niigatensis DSM 44881 = NBRC 103563, Smaragdicoccus niigatensis DSM 44881, Smaragdicoccus niigatensis DSM 44881 = NBRC 103563, Smaragdicoccus niigatensis NBRC 103563, Smaragdicoccus niigatensis NBRC 103563 = DSM 44881
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.