STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423665_00269Unannotated protein. (224 aa)    
Predicted Functional Partners:
GCA_000423665_00271
Unannotated protein.
  
 0.997
GCA_000423665_00270
Unannotated protein.
 
  
 0.983
GCA_000423665_05917
Unannotated protein.
 
  
 0.933
GCA_000423665_00275
Unannotated protein.
 
  
 0.838
GCA_000423665_01947
Unannotated protein.
 
    0.706
GCA_000423665_03676
Unannotated protein.
 
    0.703
GCA_000423665_03675
Unannotated protein.
  
    0.643
GCA_000423665_00267
Unannotated protein.
       0.554
GCA_000423665_00268
Unannotated protein.
       0.554
GCA_000423665_00279
Unannotated protein.
 
    0.473
Your Current Organism:
Solirubrobacter soli
NCBI taxonomy Id: 1123262
Other names: S. soli DSM 22325, Solirubrobacter soli DSM 22325
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.