STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423665_04607Unannotated protein. (321 aa)    
Predicted Functional Partners:
GCA_000423665_04606
Unannotated protein.
 
    
0.829
GCA_000423665_04605
Unannotated protein.
 
    
0.828
GCA_000423665_02615
Unannotated protein.
   
 
  0.713
GCA_000423665_02378
Unannotated protein.
    
 0.702
GCA_000423665_04609
Unannotated protein.
 
   
 0.701
GCA_000423665_04604
Unannotated protein.
       0.693
GCA_000423665_03965
Unannotated protein.
    
 0.687
GCA_000423665_03651
Unannotated protein.
   
 
  0.683
GCA_000423665_03816
Unannotated protein.
     
 0.683
GCA_000423665_05205
Unannotated protein.
    
 0.682
Your Current Organism:
Solirubrobacter soli
NCBI taxonomy Id: 1123262
Other names: S. soli DSM 22325, Solirubrobacter soli DSM 22325
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.