STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423665_07424Unannotated protein. (447 aa)    
Predicted Functional Partners:
GCA_000423665_07209
Unannotated protein.
 
    0.890
GCA_000423665_07425
Unannotated protein.
 
     0.862
GCA_000423665_01668
Unannotated protein.
  
 
 0.847
GCA_000423665_01939
Unannotated protein.
 
 
 0.810
GCA_000423665_07208
Unannotated protein.
 
     0.782
GCA_000423665_02383
Unannotated protein.
  
    0.611
GCA_000423665_06905
Unannotated protein.
  
 
 0.610
GCA_000423665_06412
Unannotated protein.
  
 
 0.587
GCA_000423665_05572
Unannotated protein.
  
  
 0.584
GCA_000423665_00024
Unannotated protein.
 
 
  0.583
Your Current Organism:
Solirubrobacter soli
NCBI taxonomy Id: 1123262
Other names: S. soli DSM 22325, Solirubrobacter soli DSM 22325
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.