STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423665_07699Unannotated protein. (239 aa)    
Predicted Functional Partners:
GCA_000423665_07698
Unannotated protein.
 
   
 0.944
GCA_000423665_07684
Unannotated protein.
  
  0.936
GCA_000423665_00755
Unannotated protein.
  
  0.925
GCA_000423665_06032
Unannotated protein.
 
      0.884
GCA_000423665_00758
Unannotated protein.
 
  
  0.802
GCA_000423665_06476
Unannotated protein.
 
      0.802
GCA_000423665_07700
Unannotated protein.
 
   
 0.739
GCA_000423665_07228
Unannotated protein.
    
 0.717
GCA_000423665_02731
Unannotated protein.
    
 0.676
GCA_000423665_06739
Unannotated protein.
 
   
 0.649
Your Current Organism:
Solirubrobacter soli
NCBI taxonomy Id: 1123262
Other names: S. soli DSM 22325, Solirubrobacter soli DSM 22325
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.