STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423665_08273Unannotated protein. (497 aa)    
Predicted Functional Partners:
GCA_000423665_08274
Unannotated protein.
  
    0.782
GCA_000423665_08276
Unannotated protein.
       0.731
GCA_000423665_00657
Unannotated protein.
   
  0.719
GCA_000423665_06049
Unannotated protein.
   
  0.719
GCA_000423665_08275
Unannotated protein.
       0.714
GCA_000423665_00994
Unannotated protein.
    
  0.696
GCA_000423665_00650
Unannotated protein.
    
 0.693
GCA_000423665_07229
Unannotated protein.
    
  0.683
GCA_000423665_07238
Unannotated protein.
    
  0.683
GCA_000423665_08272
Unannotated protein.
       0.668
Your Current Organism:
Solirubrobacter soli
NCBI taxonomy Id: 1123262
Other names: S. soli DSM 22325, Solirubrobacter soli DSM 22325
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.