STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711715_00858Unannotated protein. (255 aa)    
Predicted Functional Partners:
GCA_000711715_00857
Unannotated protein.
  
 0.999
GCA_000711715_00859
Unannotated protein.
 
0.999
GCA_000711715_00860
Unannotated protein.
 0.999
GCA_000711715_00861
Unannotated protein.
 
 
 0.998
GCA_000711715_00862
Unannotated protein.
  
 0.998
GCA_000711715_00863
Unannotated protein.
 
 
 0.996
GCA_000711715_01885
Unannotated protein.
  
 
 0.910
GCA_000711715_00180
Unannotated protein.
   
 
 0.891
GCA_000711715_02393
Unannotated protein.
    
  0.885
GCA_000711715_00864
Unannotated protein.
 
     0.835
Your Current Organism:
Sphingomonas astaxanthinifaciens
NCBI taxonomy Id: 1123267
Other names: S. astaxanthinifaciens DSM 22298, Sphingomonas astaxanthinifaciens DSM 22298, Sphingomonas astaxanthinifaciens NBRC 102146, Sphingomonas astaxanthinifaciens TDMA-17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.