STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHE53296.1TonB-denpendent receptor; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (802 aa)    
Predicted Functional Partners:
AHE53294.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.809
AHE53295.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.809
AHE54013.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.726
AHE54542.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.708
AHE55191.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.700
AHE56876.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.683
AHE55677.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.671
AHE57109.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.651
AHE55693.1
TonB-denpendent receptor; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.646
AHE57018.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   
 0.645
Your Current Organism:
Sphingomonas sanxanigenens
NCBI taxonomy Id: 1123269
Other names: S. sanxanigenens DSM 19645 = NX02, Sphingomonas sanxanigenens DSM 19645, Sphingomonas sanxanigenens DSM 19645 = NX02, Sphingomonas sanxanigenens NX02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.