STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN59766.1Protein of unknown function. (302 aa)    
Predicted Functional Partners:
SIN59770.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
  
     0.765
SIN59736.1
Predicted amidohydrolase.
  
     0.748
SIN59769.1
Predicted amidohydrolase.
  
     0.748
SIN59776.1
Methyltransferase domain-containing protein.
  
     0.705
SIN64174.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
     0.666
SIN69519.1
FAD/FMN-containing dehydrogenase.
  
     0.633
SIN59764.1
itaconyl-CoA hydratase.
 
     0.595
SIN59777.1
Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family.
  
     0.582
SIN59765.1
(S)-citramalyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
       0.567
SIN61546.1
Ureidoglycolate lyase.
  
     0.560
Your Current Organism:
Sphingorhabdus marina
NCBI taxonomy Id: 1123272
Other names: S. marina DSM 22363, Sphingopyxis marina DSM 22363, Sphingopyxis marina FR1087, Sphingopyxis marina JCM 14161, Sphingopyxis sp. FR1087, Sphingorhabdus marina DSM 22363
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