STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN60678.1Nitroreductase family protein. (371 aa)    
Predicted Functional Partners:
SIN60674.1
Hypothetical protein.
       0.701
SIN60682.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
 
  0.594
SIN59696.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
    
 0.571
SIN88485.1
uroporphyrin-III C-methyltransferase.
    
 0.571
SIN92461.1
Ribosomal protein S12 methylthiotransferase accessory factor.
  
  
 0.478
SIN59911.1
Glutamate synthase (NADPH) large subunit.
      
 0.420
Your Current Organism:
Sphingorhabdus marina
NCBI taxonomy Id: 1123272
Other names: S. marina DSM 22363, Sphingopyxis marina DSM 22363, Sphingopyxis marina FR1087, Sphingopyxis marina JCM 14161, Sphingopyxis sp. FR1087, Sphingorhabdus marina DSM 22363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.