STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN62536.1Glutathione S-transferase. (209 aa)    
Predicted Functional Partners:
SIN62531.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
  
    0.774
SIN62525.1
Hypothetical protein.
       0.773
SIN62519.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
   
   0.681
SIO10387.1
Glutathione S-transferase.
  
  
  0.634
SIN62545.1
Uncharacterized domain 1-containing protein.
 
     0.567
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.523
SIN62542.1
Rieske [2Fe-2S] domain-containing protein.
       0.504
SIN59916.1
Glutathione S-transferase.
  
  
  0.502
SIO11402.1
Glutathione S-transferase.
  
  
  0.472
SIN66228.1
Glutathione S-transferase.
  
     0.469
Your Current Organism:
Sphingorhabdus marina
NCBI taxonomy Id: 1123272
Other names: S. marina DSM 22363, Sphingopyxis marina DSM 22363, Sphingopyxis marina FR1087, Sphingopyxis marina JCM 14161, Sphingopyxis sp. FR1087, Sphingorhabdus marina DSM 22363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.