STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN63014.1Alpha-galactosidase. (705 aa)    
Predicted Functional Partners:
SIN59821.1
Beta-galactosidase.
 
  
 0.952
SIO14540.1
Sucrose phosphorylase.
  
 
 0.899
SIN68808.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.779
SIN63302.1
Predicted dehydrogenase.
  
  
  0.733
SIN60589.1
Galactose mutarotase.
  
 
  0.519
SIO11653.1
beta-N-acetylhexosaminidase.
     
 0.501
SIN63018.1
Hypothetical protein.
       0.475
SIN65013.1
YHYH protein.
     
 0.445
SIN68520.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
    0.427
SIN63789.1
Pyridine nucleotide-disulphide oxidoreductase.
  
     0.417
Your Current Organism:
Sphingorhabdus marina
NCBI taxonomy Id: 1123272
Other names: S. marina DSM 22363, Sphingopyxis marina DSM 22363, Sphingopyxis marina FR1087, Sphingopyxis marina JCM 14161, Sphingopyxis sp. FR1087, Sphingorhabdus marina DSM 22363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.