STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN63452.1Cystathionine beta-lyase. (421 aa)    
Predicted Functional Partners:
SIN63458.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
 
 
 0.993
SIO03990.1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.985
SIO11322.1
Cysteine synthase A.
 
 0.985
SIO16609.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
  
 
 0.949
SIN65271.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
  
 
 0.944
SIN65829.1
Homoserine dehydrogenase.
  
 
 0.937
SIN68077.1
O-acetylhomoserine sulfhydrylase.
 
 
0.929
SIO16637.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.925
SIN68569.1
Aspartate aminotransferase.
   
 
 0.920
SIN87848.1
L-threonine ammonia-lyase.
  
 
 0.907
Your Current Organism:
Sphingorhabdus marina
NCBI taxonomy Id: 1123272
Other names: S. marina DSM 22363, Sphingopyxis marina DSM 22363, Sphingopyxis marina FR1087, Sphingopyxis marina JCM 14161, Sphingopyxis sp. FR1087, Sphingorhabdus marina DSM 22363
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.