STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN64628.1NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (246 aa)    
Predicted Functional Partners:
SIO13074.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
     0.768
SIN64589.1
Short chain dehydrogenase.
  
  
  0.766
SIO14128.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.748
SIN62652.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.743
SIN62640.1
3(or 17)beta-hydroxysteroid dehydrogenase.
  
     0.741
SIN59800.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
  
 
  0.738
SIO15519.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.737
SIN64620.1
Sugar lactone lactonase YvrE.
  
 
 0.733
SIN65315.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.731
SIN64671.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.717
Your Current Organism:
Sphingorhabdus marina
NCBI taxonomy Id: 1123272
Other names: S. marina DSM 22363, Sphingopyxis marina DSM 22363, Sphingopyxis marina FR1087, Sphingopyxis marina JCM 14161, Sphingopyxis sp. FR1087, Sphingorhabdus marina DSM 22363
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