STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN65847.1Outer membrane transport energization protein TonB. (218 aa)    
Predicted Functional Partners:
SIN65858.1
Outer membrane transport energization protein ExbB (TC 2.C.1.1.1).
 
 
 0.947
SIN64332.1
Vitamin B12 transporter.
 
 
 
 0.909
SIN65866.1
Outer membrane transport energization protein ExbD (TC 2.C.1.1.1).
 
 
 0.898
SIN65876.1
Outer membrane transport energization protein ExbD (TC 2.C.1.1.1).
 
 
 0.862
SIN98353.1
Hypothetical protein.
  
 
   0.675
SIN59501.1
Biopolymer transport protein ExbD.
 
 
 0.667
SIO12070.1
Outer membrane receptor proteins, mostly Fe transport.
  
   0.615
SIN63921.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.607
SIN60009.1
Peptidylprolyl isomerase.
  
     0.590
SIN62647.1
Iron complex outermembrane recepter protein.
  
   0.586
Your Current Organism:
Sphingorhabdus marina
NCBI taxonomy Id: 1123272
Other names: S. marina DSM 22363, Sphingopyxis marina DSM 22363, Sphingopyxis marina FR1087, Sphingopyxis marina JCM 14161, Sphingopyxis sp. FR1087, Sphingorhabdus marina DSM 22363
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.