STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN66423.1Endonuclease YncB, thermonuclease family. (177 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.818
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.743
SIN66413.1
PilZ domain-containing protein.
       0.615
SIN59658.1
Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family.
    
 0.544
SIO18362.1
ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family.
    
 0.544
SIO22737.1
ATP-dependent RNA helicase RhlE.
    
 0.544
SIN61575.1
Molybdenum cofactor synthesis domain-containing protein.
    
  0.519
SIN97684.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
  0.519
SIN66433.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
     
 0.502
SIN66441.1
Steroid 5-alpha reductase family enzyme.
       0.500
Your Current Organism:
Sphingorhabdus marina
NCBI taxonomy Id: 1123272
Other names: S. marina DSM 22363, Sphingopyxis marina DSM 22363, Sphingopyxis marina FR1087, Sphingopyxis marina JCM 14161, Sphingopyxis sp. FR1087, Sphingorhabdus marina DSM 22363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.