STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN83274.18-oxo-dGTP diphosphatase. (142 aa)    
Predicted Functional Partners:
SIN83254.1
Putative NAD(P)H quinone oxidoreductase, PIG3 family.
       0.773
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.662
SIN60725.1
Protein required for attachment to host cells.
  
     0.652
SIO14025.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.607
SIN61234.1
Uncharacterized conserved protein, DUF1330 family.
  
     0.593
SIN83229.1
Uncharacterized small protein, DUF1192 family.
       0.545
SIO23107.1
Hypothetical protein.
  
     0.545
SIN60485.1
Hypothetical protein.
  
     0.530
SIO04490.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.526
SIN83297.1
Hypothetical protein.
       0.498
Your Current Organism:
Sphingorhabdus marina
NCBI taxonomy Id: 1123272
Other names: S. marina DSM 22363, Sphingopyxis marina DSM 22363, Sphingopyxis marina FR1087, Sphingopyxis marina JCM 14161, Sphingopyxis sp. FR1087, Sphingorhabdus marina DSM 22363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.