STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN84441.1Pimeloyl-ACP methyl ester carboxylesterase. (327 aa)    
Predicted Functional Partners:
SIN82551.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.719
SIN85540.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.535
SIN84417.1
Cold-shock DNA-binding protein family.
       0.511
SIO06694.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
  
  0.503
SIN60293.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.481
SIN67344.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.477
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.467
SIN61994.1
Methyltransferase domain-containing protein.
  
     0.436
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.434
SIN59889.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
  
  0.403
Your Current Organism:
Sphingorhabdus marina
NCBI taxonomy Id: 1123272
Other names: S. marina DSM 22363, Sphingopyxis marina DSM 22363, Sphingopyxis marina FR1087, Sphingopyxis marina JCM 14161, Sphingopyxis sp. FR1087, Sphingorhabdus marina DSM 22363
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