STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN91057.1Exosortase A system-associated hydrolase 1. (269 aa)    
Predicted Functional Partners:
SIN91114.1
Phosphopantetheine attachment site.
 
     0.963
SIN91189.1
Diaminopimelate decarboxylase.
 
     0.908
SIN91163.1
acyl-CoA ligase (AMP-forming), exosortase A-associated.
 
     0.888
SIN91215.1
Polysaccharide export outer membrane protein.
 
     0.857
SIN91245.1
Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily.
 
     0.855
SIN91414.1
Sugar transferase, PEP-CTERM/EpsH1 system associated.
 
     0.840
SIN91441.1
Exosortase A.
 
     0.834
SIN91358.1
Polysaccharide deacetylase family protein, PEP-CTERM locus subfamily.
 
     0.823
SIN91387.1
FemAB-related protein, PEP-CTERM system-associated.
 
     0.821
SIN91088.1
Hypothetical protein.
       0.782
Your Current Organism:
Sphingorhabdus marina
NCBI taxonomy Id: 1123272
Other names: S. marina DSM 22363, Sphingopyxis marina DSM 22363, Sphingopyxis marina FR1087, Sphingopyxis marina JCM 14161, Sphingopyxis sp. FR1087, Sphingorhabdus marina DSM 22363
Server load: low (20%) [HD]