STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN95518.1Hypothetical protein. (288 aa)    
Predicted Functional Partners:
SIN95544.1
Hypothetical protein.
       0.773
SIN95572.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.537
SIN82607.1
Transcriptional regulator, TetR family.
  
     0.517
SIN65548.1
Rieske [2Fe-2S] domain-containing protein.
  
  
  0.505
SIN62542.1
Rieske [2Fe-2S] domain-containing protein.
  
  
  0.453
SIN65096.1
Rieske [2Fe-2S] domain-containing protein.
  
  
  0.441
SIN82588.1
Catechol 2,3-dioxygenase.
  
  
  0.439
SIN68841.1
solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.428
SIN67211.1
Hypothetical protein; Manually curated.
  
     0.413
Your Current Organism:
Sphingorhabdus marina
NCBI taxonomy Id: 1123272
Other names: S. marina DSM 22363, Sphingopyxis marina DSM 22363, Sphingopyxis marina FR1087, Sphingopyxis marina JCM 14161, Sphingopyxis sp. FR1087, Sphingorhabdus marina DSM 22363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.