STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374065_02291Unannotated protein. (291 aa)    
Predicted Functional Partners:
GCA_000374065_02290
Unannotated protein.
       0.554
GCA_000374065_00604
Unannotated protein.
  
   0.552
GCA_000374065_02512
Unannotated protein.
  
   0.551
GCA_000374065_01172
Unannotated protein.
    
   0.544
GCA_000374065_03877
Unannotated protein.
    
  0.540
GCA_000374065_03695
Unannotated protein.
  
     0.506
GCA_000374065_02292
Unannotated protein.
       0.485
GCA_000374065_05214
Unannotated protein.
  
     0.443
GCA_000374065_00550
Unannotated protein.
  
     0.437
GCA_000374065_05615
Unannotated protein.
  
     0.425
Your Current Organism:
Spirosoma luteum
NCBI taxonomy Id: 1123276
Other names: S. luteum DSM 19990, Spirosoma luteum DSM 19990
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.