STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374025_01131Unannotated protein. (508 aa)    
Predicted Functional Partners:
GCA_000374025_05421
Unannotated protein.
    
 0.724
GCA_000374025_05928
Unannotated protein.
    
 0.724
GCA_000374025_02245
Unannotated protein.
   
 
  0.708
GCA_000374025_03407
Unannotated protein.
    
 0.693
GCA_000374025_00885
Unannotated protein.
  
 
 0.683
GCA_000374025_00884
Unannotated protein.
  
 
 0.681
GCA_000374025_01130
Unannotated protein.
 
     0.676
GCA_000374025_02637
Unannotated protein.
   
  0.663
GCA_000374025_02424
Unannotated protein.
    
 0.659
GCA_000374025_04154
Unannotated protein.
  
 
 0.636
Your Current Organism:
Spirosoma panaciterrae
NCBI taxonomy Id: 1123277
Other names: S. panaciterrae DSM 21099, Spirosoma panaciterrae DSM 21099
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.