STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374025_02279Unannotated protein. (588 aa)    
Predicted Functional Partners:
GCA_000374025_02278
Unannotated protein.
 
 
   0.967
GCA_000374025_00836
Unannotated protein.
  
 
   0.751
GCA_000374025_05641
Unannotated protein.
  
 
   0.749
GCA_000374025_02277
Unannotated protein.
 
     0.718
GCA_000374025_00588
Unannotated protein.
  
 
   0.706
GCA_000374025_06799
Unannotated protein.
  
     0.698
GCA_000374025_06480
Unannotated protein.
  
 
   0.674
GCA_000374025_01531
Unannotated protein.
  
 
   0.649
GCA_000374025_01545
Unannotated protein.
  
 
   0.638
GCA_000374025_05153
Unannotated protein.
  
 
   0.638
Your Current Organism:
Spirosoma panaciterrae
NCBI taxonomy Id: 1123277
Other names: S. panaciterrae DSM 21099, Spirosoma panaciterrae DSM 21099
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.