STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374025_02394Unannotated protein. (285 aa)    
Predicted Functional Partners:
GCA_000374025_03611
Unannotated protein.
 
 0.999
GCA_000374025_05859
Unannotated protein.
   
 0.929
GCA_000374025_02395
Unannotated protein.
       0.615
GCA_000374025_02392
Unannotated protein.
       0.534
GCA_000374025_02123
Unannotated protein.
     
 0.501
GCA_000374025_02259
Unannotated protein.
  
   
 0.501
GCA_000374025_02393
Unannotated protein.
       0.499
GCA_000374025_05594
Unannotated protein.
  
     0.443
GCA_000374025_04532
Unannotated protein.
     
 0.413
GCA_000374025_00851
Unannotated protein.
 
   
 0.406
Your Current Organism:
Spirosoma panaciterrae
NCBI taxonomy Id: 1123277
Other names: S. panaciterrae DSM 21099, Spirosoma panaciterrae DSM 21099
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.