STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374025_03811Unannotated protein. (1158 aa)    
Predicted Functional Partners:
GCA_000374025_03812
Unannotated protein.
 
     0.933
GCA_000374025_03810
Unannotated protein.
 
    0.830
GCA_000374025_04146
Unannotated protein.
 
     0.769
GCA_000374025_02620
Unannotated protein.
  
     0.765
GCA_000374025_02811
Unannotated protein.
  
     0.743
GCA_000374025_01530
Unannotated protein.
  
     0.735
GCA_000374025_05154
Unannotated protein.
  
     0.731
GCA_000374025_04721
Unannotated protein.
  
     0.725
GCA_000374025_05144
Unannotated protein.
  
     0.724
GCA_000374025_01544
Unannotated protein.
  
     0.716
Your Current Organism:
Spirosoma panaciterrae
NCBI taxonomy Id: 1123277
Other names: S. panaciterrae DSM 21099, Spirosoma panaciterrae DSM 21099
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.