STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374025_04587Unannotated protein. (800 aa)    
Predicted Functional Partners:
GCA_000374025_04588
Unannotated protein.
 
  0.948
GCA_000374025_03645
Unannotated protein.
 
  0.899
GCA_000374025_03889
Unannotated protein.
 
     0.759
GCA_000374025_02872
Unannotated protein.
    
  0.708
GCA_000374025_03590
Unannotated protein.
 
  0.704
GCA_000374025_00755
Unannotated protein.
    
  0.682
GCA_000374025_00419
Unannotated protein.
 
  0.669
GCA_000374025_00396
Unannotated protein.
   
  0.565
GCA_000374025_00674
Unannotated protein.
  
 
 
0.565
GCA_000374025_00739
Unannotated protein.
   
  0.565
Your Current Organism:
Spirosoma panaciterrae
NCBI taxonomy Id: 1123277
Other names: S. panaciterrae DSM 21099, Spirosoma panaciterrae DSM 21099
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.