STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420325_00879Unannotated protein. (99 aa)    
Predicted Functional Partners:
GCA_000420325_00878
Unannotated protein.
  
  
 0.983
GCA_000420325_02707
Unannotated protein.
  
  
 0.776
GCA_000420325_03019
Unannotated protein.
  
  
 0.776
GCA_000420325_01781
Unannotated protein.
   
   0.759
GCA_000420325_00880
Unannotated protein.
  
    0.752
GCA_000420325_02181
Unannotated protein.
 
  
 0.725
GCA_000420325_00478
Unannotated protein.
    
 
 0.673
GCA_000420325_03453
Unannotated protein.
    
 
 0.673
GCA_000420325_00729
Unannotated protein.
   
 
 0.640
GCA_000420325_02860
Unannotated protein.
    
 
 0.640
Your Current Organism:
Spongiibacter tropicus
NCBI taxonomy Id: 1123279
Other names: S. tropicus DSM 19543, Spongiibacter tropicus DSM 19543
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.