STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420325_01970Unannotated protein. (223 aa)    
Predicted Functional Partners:
GCA_000420325_01969
Unannotated protein.
     0.995
GCA_000420325_01968
Unannotated protein.
 
     0.956
GCA_000420325_01971
Unannotated protein.
 
     0.950
GCA_000420325_01972
Unannotated protein.
 
     0.946
GCA_000420325_01977
Unannotated protein.
 
     0.825
GCA_000420325_01974
Unannotated protein.
 
     0.807
GCA_000420325_01976
Unannotated protein.
 
     0.798
GCA_000420325_01975
Unannotated protein.
 
     0.776
GCA_000420325_01973
Unannotated protein.
       0.656
GCA_000420325_01967
Unannotated protein.
       0.495
Your Current Organism:
Spongiibacter tropicus
NCBI taxonomy Id: 1123279
Other names: S. tropicus DSM 19543, Spongiibacter tropicus DSM 19543
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.